PerMedCoE partners at Institut Curie and the University of Heidelberg developed a workflow that facilitates the prediction of personalised targeted drug combinations for cancer treatment, using CARNIVAL (Trairathphisan et al. 2021), PROFILE (Béal et al. 2019) and MaBoSS (Stoll et al. 2012, 2017) software. As a proof of concept, the workflow has successfully been run on the BSC MareNostrum 4 supercomputer.
Our Autumn agenda of courses cover topics such as data protection and security, cobrexa.ji and croupier.
Researchers from European and North American universities will gather at the headquarters of the Barcelona Supercomputing Centre to compare tools simulating agent-based models used in biomedical projects.
Trainings, webinars & courses
👩🏾💻 11 October 2022 – Data protection and security aspects of running simulations on personal data with HPC
Webinar: Croupier, an user-centric meta-orchestrator for cross-platform workflow delivery and execution
👩🏾💻 15 November 2022 – Croupier, an user-centric meta-orchestrator for cross-platform workflow delivery and execution
15 November 2022. This course introduces COBREXA.jl, a toolkit for working with large constraint-based metabolic models
to run in pre-exascale
Use cases driving the
PerMed solutions in
the new European
professionals in the
use of HPC/Exascale
Building the basis
for the sustainability
of the PerMedCoE