PerMedCoE is attending the 21st European Conference on Computational Biology held in Sitges, Catalonia. This is where you can find our work:
Posters
18th September – 13h to 14.30h
Performance of multi-scale cell population simulators in different High-Performance Computing architectures
by Jose Estragués, Junior Research Engineer. Computational Biology Life Sciences Group. Barcelona Supercomputing Centre.
19th September – 17.30 to 19.30h
Implementation of cellular transport mechanisms within a multiscale simulation framework
by Othmane Hayoun Mya, Master student. Computational Biology Life Sciences Group. Barcelona Supercomputing Centre.
20th September – 17.30h to 19.30h
Towards a community-driven benchmark by PerMedCoE: comparing three agent-based modeling frameworks
by Thalia Diniaco, Junior Research Engineer. Computational Biology Life Sciences Group. Barcelona Supercomputing Centre.
PerMedCoE Summer School – Stand + Q&A
Monday 19th – 3 pm
Join our Q&A session and learn more about our forthcoming Summer School in June 2023. If you visit our PerMedCoE stand from 3 to 3.30 pm on Monday, we’ll be presenting the program of our PerMedCoE Summer School. Daniel Thomas, Scientific Project Manager and Summer School Organiser, will give an overview of the event.
PerMedCoE Summer School: from pathway modeling tools to cell-level simulations
25-30th June 2023
Workshops
13th September – 13.30h to 16:30h CEST
Simulating cellular behaviours: advancing HPC-enabled Computational Biology
Arnau Montagud and Marta Lloret are co-organising the “Simulating cellular behaviours: advancing HPC-enabled Computational Biology” workshop at the European Conference on Computational Biology in Barcelona.
This workshop will bring together researchers that develop or employ methodologies and tools for data analytics, modelling and/or machine learning focusing on simulating cellular behaviours. The focus will be on identifying ways to combine HPC-based methods to scale up computation with mechanistic and statistical modelling to build predictive dynamical models.
Researchers from computational modelling and HPC fields rarely have the opportunity to discuss common grounds. This workshop is an opportunity to exchange, discuss and identify limitations and complementarities.
13th September – 13.30h to 16:30h CEST
Invited speakers
Director of the Research Program in Quantitative Sciences, Co-Director of
the Convergence Institute and Associate Director of Quantitative Sciences at the Johns Hopkins Kimmel Cancer Center.
Associate Professor at the Departament of Computer Science and Engineering of Instituto Superior Técnico (IST) – Universidade de Lisboa and a researcher at INESC-ID Lisboa (ARSR scientific area).